Nabu 2024.1.4¶
Nabu is a tomography software used at the European Synchrotron.
Quick links:
Project maintainer: Pierre Paleo
Latest news:
February 2024: Version 2024.1.0 released
Getting started¶
Using nabu¶
Features¶
Command-line tools¶
- Command-line tools
nabu: perform tomographic reconstructionnabu-config: create a configuration file for a tomographic reconstruction (to be provided tonabu)nabu-helical: Perform a helical tomographic reconstructionnabu-helical-correct-rot: Applies the correction found by diag_to_rot to a nexus filenabu-multicor: Perform a tomographic reconstruction of a single slice using multiple centers of rotationnabu-reduce-dark-flat: Compute reduce dark(s) and flat(s) of a datasetnabu-histogram: extract or compute a histogram of a reconstructed volumenabu-double-flatfield: compute the “double flat-field” of a datasetnabu-compare-volumes: compare two HDF5 volumesnabu-shrink-volume: reduce a datasetnabu-composite-cor: Find the center of rotation from a scan or a series of scans.nabu-rotate: apply a rotation on all the images of a datasetnabu-compare-volumes: generic tool to compare two HDF5 volumesnabu-zsplit: split a H5-NX file according to z-positionsnabu-generate-info: generate the volume “.infofile” for legacy toolsnabu-validator: check that a dataset can be reconstructednabu-castapply volume castingnabu-helical-prepare-weights-double: create the weights map file which is mandatory for the helical pipeline.nabu-composite-cor: Application to extract the center of rotation for a scan or a series of scans.nabu-poly2map: builds a distortion map.nabu-stitching: perform stitching on a set of volume or projectionsnabu-stitching-config: create a configuration file for a stitching (to provide tonabu-stitching)nabu-shrink-dataset: Shrink a NX datasetnabu-diag2rot: Find the cor as a function f z translation and write an hdf5 which contains interpolable tables.nabu-display-timings: Display reconstruction performances from a log file