nabu.io package

Submodules

• nabu.io.cast_volume module
  • get_default_output_volume()
  • cast_volume()
• nabu.io.detector_distortion module
  • DetectorDistortionBase
    • DetectorDistortionBase.transform()
    • DetectorDistortionBase.get_adapted_subregion()
    • DetectorDistortionBase.set_sub_region_transformation()
    • DetectorDistortionBase.set_full_transformation()
    • DetectorDistortionBase.get_actual_shapes_source_target()
  • DetectorDistortionMapsXZ
• nabu.io.reader module
  • Reader
    • Reader.get_data()
    • Reader.release()
  • NPReader
    • NPReader.multi_load
    • NPReader.get_data()
    • NPReader.release()
  • EDFReader
    • EDFReader.multi_load
    • EDFReader.read()
    • EDFReader.get_data()
  • HDF5Reader
    • HDF5Reader.multi_load
    • HDF5Reader.get_data()
    • HDF5Reader.release()
  • HDF5Loader
    • HDF5Loader.load_data()
  • ChunkReader
    • ChunkReader.get_data()
    • ChunkReader.load_files()
    • ChunkReader.load_data()
    • ChunkReader.data
  • load_images_from_dataurl_dict()
  • load_images_stack_from_hdf5()
  • get_hdf5_dataset_shape()
  • check_virtual_sources_exist()
  • import_h5_to_dict()
• nabu.io.reader_helical module
  • ChunkReaderHelical
    • ChunkReaderHelical.set_data_buffer()
    • ChunkReaderHelical.get_binning()
    • ChunkReaderHelical.load_files()
    • ChunkReaderHelical.load_data()
    • ChunkReaderHelical.data
• nabu.io.tiffwriter_zmm module
  • TIFFWriter
    • TIFFWriter.write()
    • TIFFWriter.get_filename()
• nabu.io.utils module
  • get_compacted_dataslices()
  • get_first_hdf5_entry()
  • hdf5_entry_exists()
  • get_h5_value()
  • get_h5_str_value()
  • create_dict_of_indices()
  • convert_dict_values()
  • EntryReader
  • DatasetReader
  • file_format_is_edf()
  • file_format_is_jp2k()
  • file_format_is_tiff()
  • file_format_is_hdf5()
  • get_output_volume()
• nabu.io.writer module
  • get_datetime()
  • Writer
    • Writer.get_filename()
  • TomoscanNXProcessWriter
    • TomoscanNXProcessWriter.write()
  • h5_write_object()
  • NXProcessWriter
    • NXProcessWriter.write()
  • NXVolVolume
    • NXVolVolume.save()
    • NXVolVolume.save_metadata()
    • NXVolVolume.browse_data_files()
  • LegacyNXProcessWriter
  • export_dict_to_h5()
  • create_virtual_layout()
  • merge_hdf5_files()
  • TIFFWriter
    • TIFFWriter.write()
  • EDFWriter
    • EDFWriter.write()
  • JP2Writer
    • JP2Writer.write()
  • NPYWriter
    • NPYWriter.write()
  • NPZWriter
    • NPZWriter.write()
  • HSTVolWriter
    • HSTVolWriter.generate_metadata()
    • HSTVolWriter.sanitize_metadata()
    • HSTVolWriter.write()
  • HSTVolVolume
    • HSTVolVolume.save()
    • HSTVolVolume.save_metadata()
    • HSTVolVolume.browse_data_files()

Module contents